Genome wide association studies reveals genetic loci associated with water logging tolerance in Soybean [Glycine max (L.) Merr.]

Genome wide association studies reveals genetic loci associated with water logging tolerance in Soybean [Glycine max (L.) Merr.]


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Authors

  • SUBHASH CHANDRA ICAR-Indian Institute of Soybean Research, Indore-452 001
  • M B RATNAPARKHE ICAR-Indian Institute of Soybean Research, Indore-452 001
  • G K SATPUTE ICAR-Indian Institute of Soybean Research, Indore-452 001
  • SANJAY GUPTA ICAR-Indian Institute of Soybean Research, Indore-452 001
  • GIRIRAJ KUMAWAT ICAR-Indian Institute of Soybean Research, Indore-452 001
  • K RUCHA ICAR-Indian Institute of Soybean Research, Indore-452 001
  • DIPENDRA SINGH ICAR-Indian Institute of Soybean Research, Indore-452 001
  • V. NATARAJ ICAR-Indian Institute of Soybean Research, Indore-452 001
  • R RAGHUVANSHI ICAR-Indian Institute of Soybean Research, Indore-452 001
  • A CHITIKININI ICAR-Indian Institute of Soybean Research, Indore-452 001
  • RAJEEV VARSHNEY ICAR-Indian Institute of Soybean Research, Indore-452 001
  • AJAY K SINGH ICAR-Indian Institute of Soybean Research, Indore-452 001
  • V RAJESH ICAR-Indian Institute of Soybean Research, Indore-452 001
  • M SHIVAKUMAR ICAR-Indian Institute of Soybean Research, Indore-452 001
  • BHAGWAN BAMNIYA ICAR-Indian Institute of Soybean Research, Indore-452 001
  • MANOJ K SRIVASTVA ICAR-Indian Institute of Soybean Research, Indore-452 001

https://doi.org/10.56739/jor.v40iSpecialissue.145088

Keywords:

GWAS, Genotyping by sequencing, Germplasm Accessions, SNP, Soybean, Water logging

Abstract

In this investigation, a GWAS analysis was performed for four water logging tolerance traits in a panel of 265 soybean germplasm accessions with 66719 SNPs. A total of 29 SNPs and some candidate genes associated with different water logging tolerance traits were identified. This study also identified some soybean accessions, having superior water logging tolerance ability at vegetative and reproductive stages, which may be used as potential donors in soybean improvement programs.

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References

Chandra S, Das R T, Nagar S, Satpute G K, Kumawat G, Ratnaparkhe M B, Gupta S et al, 2022. Soybean Improvement for Water logging Tolerance. In: Wani, S.H., Sofi, N.u.R., Bhat, M.A., Lin, F. (eds) Soybean Improvement Pp. 73-97. Springer, Cham. DOI: https://doi.org/10.1007/978-3-031-12232-3_3

Chandra S, Satpute G K, Nagar S, Singh M, Kumawat G, Rajesh V, 2020. Reproductive stage water-logging tolerance: a critical assessment of traits in Soybean. Soybean Res,18(2):84–91.

Journal of Oilseeds Research

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Submitted

2023-11-09

Published

2023-12-14

Issue

Vol. 40 No. Specialissue (2023): Journal of Oilseeds Research

Section

Articles

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How to Cite

SUBHASH CHANDRA, M B RATNAPARKHE, G K SATPUTE, SANJAY GUPTA, GIRIRAJ KUMAWAT, K RUCHA, DIPENDRA SINGH, V. NATARAJ, R RAGHUVANSHI, A CHITIKININI, RAJEEV VARSHNEY, AJAY K SINGH, V RAJESH, M SHIVAKUMAR, BHAGWAN BAMNIYA, & MANOJ K SRIVASTVA. (2023). Genome wide association studies reveals genetic loci associated with water logging tolerance in Soybean [Glycine max (L.) Merr.]: Genome wide association studies reveals genetic loci associated with water logging tolerance in Soybean [Glycine max (L.) Merr.]. Journal of Oilseeds Research, 40(Specialissue). https://doi.org/10.56739/jor.v40iSpecialissue.145088