Genome-wide association study (GWAS) reveals key loci associated with rhizoctonia aerial blight resistance in soybean: Genome-wide association study (GWAS) reveals key loci associated with rhizoctonia aerial blight resistance in soybean

RISHIRAJ RAGHUVANSHI; SHUBHAM BIRLA; NAGARAM; RUCHA KAVISHWAR; S NISHTH; RUCHI SHROTI; LAXMAN SINGH RAJPOOT; V NATARAJ; SUBHASH CHANDRA; GIRIRAJ KUMAWAT; GYANESH K. SATPUTE; SHIVAKUMAR; M SHRIVASTAVA; VIRAJ KAMLE; SANJAY GUPTA; AJAY SINGH; A CHITIKININI; RAJEEV VARSHNEY; MILIND; B RATNAPARKHE

doi:10.56739/jor.v40iSpecialissue.145220

Authors

RISHIRAJ RAGHUVANSHI ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
SHUBHAM BIRLA ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
NAGARAM ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
RUCHA KAVISHWAR ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
S NISHTH ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
RUCHI SHROTI ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
LAXMAN SINGH RAJPOOT ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
V NATARAJ ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
SUBHASH CHANDRA ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
GIRIRAJ KUMAWAT ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
GYANESH K. SATPUTE ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
SHIVAKUMAR ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
M SHRIVASTAVA ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
VIRAJ KAMLE ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
SANJAY GUPTA ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
AJAY SINGH ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
A CHITIKININI ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
RAJEEV VARSHNEY ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
MILIND ICAR-Indian Institute of Soybean Research, Indore-452 001, India.
B RATNAPARKHE ICAR-Indian Institute of Soybean Research, Indore-452 001, India.

https://doi.org/10.56739/jor.v40iSpecialissue.145220

Keywords:

GWAS, RAB resistance, Rhizoctonia Arial blight

Abstract

Rhizoctonia Aerial Blight (RAB) is caused by Rhizoctonia solani is one of the most worldwide devastating diseases in soybean. In present study, a GWAS was conducted for rhizoctonia aerial blight (RAB) resistance by using 269 diverse soybean genotypes for two consecutive year 2020 & 2021. GWAS analysis revealed two most significant SNPs, located very close each other on chromosome 12 (3193687 & 3193885) and 16 (6074131 & 6076330). Some candidate genes such as related to leucine-rich repeats containing (LRRNT; Glyma.16g064200), protein ubiquitination (F-box-like) and amino acid transmembrane transport (Trp_Tyr_perm; Glyma.16g062500 & Glyma.16g062600) were identified near the significant SNP positions. Our findings may be relevant for future studies and provide insights into the genetic basis for RAB resistance in soybean.

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References

Surbhi K, Singh K P, Singh N K, Aravind T, 2021. Assessment of genetic diversity among soybean genotypes differing in response to aerial blight (Rhizoctonia solani Kuhn) using SSR markers, Journal of Phytopathology, 169(1):37-44.

Zhou F, Guo Y, Qiu L J, 2016. Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean, BMC plant biology, 16(1):1.

Genome-wide association study (GWAS) reveals key loci associated with rhizoctonia aerial blight resistance in soybean