Establishment of GISH and multi-color GISH techniques to simultaneously discriminate different genomes in Erianthus procerus x Saccharum officinarum introgressed clones


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Authors

  • Sobhakumari V.P ICAR- Sugarcane Breeding Institute
  • Mohanraj K ICAR- SUGARCANE BREEDING INSTITUTE
  • Mohanaprabha M ICAR- SUGARCANE BREEDING INSTITUTE
  • Mathumathi R ICAR- SUGARCANE BREEDING INSTITUTE

https://doi.org/10.37580/JSR.2021.2.11.172-179

Keywords:

Saccharum; Erianthus; Introgression; Mitosis; GISH; Multi-color GISH

Abstract

An attempt was made to identify the chromosomes from different species genomes in BC₂ progenies of Erianthus procerus x Saccharum officinarum through multi-color GISH (MCGISH). The BC₂ population was derived from the cross between a BC1 hybrid (GU 12-14) and a commercial variety, Co 16018. The BC2 progenies were studied for their somatic chromosome number and two cytotypes were observed, i.e., 2n=92 (2) and 2n=96 (5). GISH revealed that the majority of progenies were having nine Erianthus chromosomes, except 2 clones (25-5 and 25-10) were having nine Erianthus chromosomes with one chromosome fragment. The methodology for multi-color GISH was standardized and it distinguished the chromosomes from different genomes. Interspecific recombination was also detected in somatic cells of one BC₂ clone, 25-10. The hybridity of the introgressed lines has been confirmed with amplification of Erianthus specific tandem repeat sequences.

Author Biography

  • Sobhakumari V.P, ICAR- Sugarcane Breeding Institute

    Crop Improvement Division, ICAR- Sugarcane Breeding Institute

References

Aitken K, Li J, Wang L, Qing C, Fan YH, Jackson P. 2007. Characterization of intergeneric hybrids of Erianthus rockii and Saccharum using molecular markers. Genetic Resources and Crop Evolution 54: 1395–1405 doi.org/10.1007/s10722-006-9124-2

Cai Q, Aitken K, Deng H, Chen XW, Fu C, Jackson PA, McIntyre CL. 2005. Verification of the introgression of Erianthus arundinaceus germplasm into sugarcane using molecular markers. Plant Breeding 124: 322-328

Choi YA, Tao R, Yonemori K, Sugiura. 2002. Multi-color genomic in situ hybridization identifies parental chromosomes in somatic hybrids of Diospyros kaki and D. glandulosa. Hortscience 37: 184–186

D’Hont A, Rao P, Feldmann P, Grivet L, Islam Faridi N, Taylor P, Glaszmann JC. 1995. Identification and characterisation of sugarcane intergeneric hybrids, Saccharum officinarum x Erianthus arundinaceus, with molecular markers and DNA in situ hybridisation. Theoretical and Applied Genetics 91: 320– 326

Fukuhara S, Terajima Y, Irei S, Sakaigaichi T, Ujihara K. 2012. Identification and characterization of intergeneric hybrid of commercial sugarcane (Saccharum spp. hybrid) and Erianthus arundinaceus (Retz.) Jeswiet. Euphytica 189: 321–327.

Guan B, Wang K, Liang Zhou B, Zhen Guo W, Zhen Zhang T. 2008. Establishment of a Multi-color Genomic in situ hybridization technique to simultaneously discriminate the three Interspecific hybrid genomes in Gossypium. Journal of Integrative Plant Biology 50: 345–351

Huang Y, Wu J, Wang P, Lin Y, Fu C, Deng Z, Wang Q, Li Q, Chen R, M Zhang M. 2015. Characterization of chromosome inheritance of the intergeneric BC₂ and BC3 progeny between Saccharum spp. and E. arundinaceus. PLoS One 10: e0133722

Li CB, Zhang DM, Ge S, Lu BR, Hong DY. 2001a. Differentiation and intergenomic relationships among C, E and D genomes in the Oryza officinalis complex (Poaceae) as revealed by multicolor genomic in situ hybridization. Theoretical and Applied Genetics 103: 197- 203

Li CB, Zhang DM, Ge S, Lu BR, Hong DY. 2001b. Identification of genome constitution of Oryza malampuzhaensis, O. minuta, and O. punctata by multicolor genomic in situ hybridization. Theoretical and Applied Genetics. 103:204–211

Martin A, Cabrera A, Esteban E, Hernandez P, Ramirez MC, Rubiales D. 1999. A fertile amphiploid between diploid wheat (Triticum tauschii) and crested wheat grass (Agropyron cristatum). Genome 42: 519-524

Mohanraj K, Oshin PJ, SuganyaA. 2019. Evaluation of Erianthus procerus introgressed sugarcane clones for water deficit stress and red rot resistance. International Journal of Current Microbiology and Applied Science 8: 590-598

Nair NV, Mohanraj K, Sunadaravelpandian K, Suganya A, Selvi A, Appunu C. 2017. Characterization of an intergeneric hybrid of Erianthus procerus × Saccharum officinarum and its backcross progenies. Euphytica 213: 267

Paterson AH, Brubaker KL, Wendel JF. 1993. A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis. Plant Molecular Biology Reports 11; 122–127

Piperidis G, Christopher MJ, Carroll BJ, Berding N, D’Hont A. 2000. Molecular contribution to selection of intergeneric hybrids between sugarcane and the wild species Erianthus arundinaceus. Genome 43: 1033–1037

Piperidis N, Chen J, Deng H, Wang L, Jackson P, Piperidis G. 2010. GISH characterization of Erianthus arundinaceus chromosomes in three generations of sugarcane intergeneric hybrids. Genome 53: 331–336

Ram B, Sreenivasan T, Sahi B, Singh N. 2001. Introgression of low temperature tolerance and red rot resistance from Erianthus in sugarcane. Euphytica 122: 145–153

Sobhakumari VP, Asmita D. 2014. Cytogenetics and performance analysis of pre-breeding hybrids of Saccharum officinarum and Saccharum spontaneum. Journal of Sugarcane Research 4: 33-39

Sobhakumari VP, Mohanraj K, Nair NV, Mahadevaswamy HK, Ram B. 2020. Cytogenetic and molecular approaches to detect alien chromosome introgression and its impact in three successive generations of Erianthus procerus × Saccharum. Cytologia 85: 341-346

Wu J, Huang Y, Lin Y, Fu C, Liu S, Deng Z, Li Q, Huang Z, Chen R, Zhang R. 2014. Unexpected inheritance pattern of Erianthus arundinaceus chromosomes in the intergeneric progeny between Saccharum spp. and Erianthus arundinaceus. PLoS One 9: e110390

Xie S, Ramanna MS, van JM. 2010. Simultaneous identification of three different genomes in Lilium hybrids through multicolour GISH. de Vries Acta Hort. 855

Yang S, Zeng K, Chen K, Wu J, Wang Q, Li X, Deng Z, Huang Y, Huang F, Chen R, Zhang,M. 2019. Chromosome transmission in BC₄ progenies of intergeneric hybrids between Saccharum spp. and Erianthus arundinaceus (Retz.) Jeswiet. Scientific Reports 9: (1) doi:10.1038/s41598-019- 38710-8

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Submitted

04-01-2023

Published

25-04-2023

How to Cite

V.P, S., K, M., M, M., & R, M. (2023). Establishment of GISH and multi-color GISH techniques to simultaneously discriminate different genomes in Erianthus procerus x Saccharum officinarum introgressed clones. Journal of Sugarcane Research, 11(2), 172-179. https://doi.org/10.37580/JSR.2021.2.11.172-179
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