MOLECULAR CYTOGENETIC CHARACTERIZATION OF SORGHUM CHROMOSOMES IN SACCHARUM BACKGROUND AND VICE VERSA USING GENOMIC IN SITU HYBRIDIZATION


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Authors

  • V P Sobhakumari ICAR-Sugarcane Breeding Institute, Coimbatore - 641007
  • N V Nair ICAR-Sugarcane Breeding Institute, Coimbatore - 641007
  • K Mohanraj ICAR-Sugarcane Breeding Institute, Coimbatore - 641007
  • Maya Lekshmi ICAR-Sugarcane Breeding Institute, Coimbatore - 641007

Abstract

Two intergeneric hybrids of sugarcane, Co 86032 (2n=112) x Sorghum (2n=20) and Sorghum (2n=20) x S. officinarum (2n= 112), were subjected to classical as well as molecular cytological analysis. The hybridity of these clones has been confirmed by using SSR markers and chloroplast gene. During genomic in situ hybridization (GISH) the genome composition of the hybrids studied and it has revealed that it follows n+n chromosome segregation. Introgression of 10 Sorghum chromosomes in both the hybrids was observed while using Sorghum genomic DNA as the labeled probe. We report for the first time the chromosome composition and condensation behavior of Sorghum chromosomes in hybrids involving Saccharum and Sorghum.

References

Antonin W, Newmann H (2016) Chromosome condensation and decondensation during mitosis. Cell biology 40:15-22

Barber CA (1916) Studies in Indian sugarcanes. No. 2. Mem. Dept. Agric. India. Bot. Series 8:103-149

D’Hont A, Grivet L, Feldmann P, Rao S, Berding N, Glaszmann JC (1996) Characterisation of the double genome structure of modern sugarcane cultivars (Saccharum spp.) by molecular cytogenetics. Mol. Gen. Genet. 250: 405–413

D’Hont A, Rao P, Feldmann P, Grivet L, Islam-Faridi N, Taylor P, Glaszmann JC (1995) Identification and characterisation of sugarcane intergeneric hybrids, Saccharum officinarum x Erianthus arundinaceus, with molecular markers and DNA in situ hybridisation. Theor. Appl. Genet. 91: 320–326

de Wet JMJ, Gupta SC, Harlan JR, Grassl CO (1976) Cytogenetics of introgression from Saccharum x Sorghum. Crop Science 16: 568-572

Gupta SC, Harlan JR, de Wet JMJ (1978b) Cytology and morphology of a tetraploid Sorghum population recovered from a Saccharum x Sorghum hybrid. Crop Science 18: 879-883

Gupta SC, Wet JMJ de, Harlen JR (1978a) Morphology of Saccharum-Sorghum. Amer. J. Bot. 6: 936-942

Huang Y, Wu J, Wang P, Lin Y, Fu C, Deng Z, Wang Q, Li Q, Chen R, M Zhang M (2015) Characterization of chromosome inheritance of the intergeneric BC2 and BC3 progeny between Saccharum spp. and E. arundinaceus. PLoS One 10: e0133722

Janaki Ammal EK (1938) Chromosome behavior in S. spontaneum x Sorghum dura hybrids. Indian Assoc. Proc. Part 3, Abstract 143

Janaki Ammal EK, Sing TSN (1936) A preliminary note on a new Saccharum-Sorghum hybrid. Ind. J. Agri. Sci. 6:1105-1106

Janaki Ammal EK (1941) Intergeneric hybrids of Saccharum. Journal of Genetics 41: 217–253

Kandasami PA (1961) Interspecific and intergeneric hybrids of Saccharum spontaneum L. I. Functioning gametes. Cytologia 26: 117-123

Li HW, Loh CS, Lee CL (1948) Hybrids between Saccharum officinarum, Miscanthus japonicus and S. spontaneum. Botanical Bulletin of Academy of Since (Taipei) 2: 147–160

Mc Cauley DE (1995) The use of chloroplast DNA polymorphism in studies of gene flow in plants. Trends in Ecology and evolution 10: 198-202

Nair NV (1999) Production and cytomorphological analysis of intergeneric hybrids of Sorghum x Saccharum. Euphytica 108:187-191

Parthasarathy N (1948) Origin of noble sugarcanes (Saccharum officinarum). Nature 161: 608.

Piperidis G, Christopher MJ, Carroll BJ, Berding N, D’Hont A (2000) Molecular contribution to selection of intergeneric hybrids between sugarcane and the wild species Erianthus arundinaceus. Genome 43: 1033–1037

Piperidis G, D'Hont A (2001) Chromosome composition analysis of various Saccharum interspecific hybrids by genomic in situ hybridization GISH.  Proc Int Soc Technol 24: 565–566

Piperidis N, Aitken K, Hermann S (2013) Towards a reliable method to select potentially high value Erianthus hybrids. Int Sugar J.1–9

Piperidis N, Chen J, Deng H, Wang L, Jackson P, Piperidis G (2010) GISH characterization of Erianthus arundinaceus chromosomes in three generations of sugarcane intergeneric hybrids. Genome 53:331–336

Premachandran MN, Sobhakumari VP, Lekshmi M, Raffee Viola V (2017) Genome characterization of in vitro induced amphiploids of an intergeneric hybrid Erianthus arundinaceus x Saccharum spontaneum. Sugar Tech 19:386–393

Sobhakumari VP, Asmita D (2014) Cytogenetics and performance analysis of pre-breeding hybrids of saccharum officinarum and saccharum spontaneum. Journal of Sugarcane Research 4:33-39

Sobhakumari VP, Nair NV (2014) The cytological mechanism of male sterility in intergeneric hybrids of Sorghum x Saccharum. Cytologia 79: 79-83

Thomas R, Venkataraman TS (1930) Sugarcane- Sorghum hybrids. Agric. J. India 25, 164.

Venkatraman TS, Thomas R (1932) Sugarcane-Sorghum hybrids. Part I. General outline and early characters. Indian journal of Agricultural Science 2: 19-27

Wu J, Huang Y, Lin Y, Fu C, Liu S, Deng Z, Li Q, Huang Z, Chen R, Zhang R (2014) Unexpected inheritance pattern of Erianthus arundinaceus chromosomes in the intergeneric progeny between Saccharum spp. and Erianthus arundinaceus. PLoS One 9: e110390

Yu F, Wang P, Li X, Huang Y, Wang Q, Luo L, Jing Y, Liu X, Deng Z, Wu J, Yang Y, Chen R, Zhang M, Xu L (2018) Characterization of chromosome composition of sugarcane in nobilization by using genomic in situ hybridization. Molecular Cytogenetics 11: 35

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How to Cite

Sobhakumari, V. P., Nair, N. V., Mohanraj, K., & Lekshmi, M. (2019). MOLECULAR CYTOGENETIC CHARACTERIZATION OF SORGHUM CHROMOSOMES IN SACCHARUM BACKGROUND AND VICE VERSA USING GENOMIC IN SITU HYBRIDIZATION. Journal of Sugarcane Research, 8(1). https://epubs.icar.org.in/index.php/JSR/article/view/89055