Speciation of cultivated temperate and tropical Pleurotus species –an in silico prediction using conserved sequences


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Authors

  • Anupam Barh ICAR-Directorate of Mushroom Research
  • V P Sharma ICAR-Directorate of Mushroom Research
  • Shwet Kamal ICAR-Directorate of Mushroom Research http://orcid.org/0000-0002-1192-8766
  • Mahantesh Shirur ICAR-Directorate of Mushroom Research
  • Sudheer Kumar Annepu ICAR-Directorate of Mushroom Research
  • Anil Kumar ICAR-Directorate of Mushroom Research
  • R C Upadhyay ICAR-Directorate of Mushroom Research

Abstract

Conserved sequences are molecular fossil record of any organism and their evolution can be traced using the sequences. Genus Pleurotus is one of the most cultivated mushroom species for food purposes. To trace the evolution in Pleurotus species, two conserved sequences (ITS and LSU) of twenty three species were analysed and phylogenetic relationship was studied to see evolution pattern linked with domestication. The sequence were analysed using the Molecular Evolutionary Genetics Analysis (MEGA) and Bayesian phylogenetic analysis (Mr. Bayes). Analysis of LSU and ITS categorized the Pleurotus species into two groups. The differences in evolutionary rate among various species were ascertained.  Grouping of sequences confirmed that cultivation requirements of Pleurotus species might be due to allopatric variation occurred during the evolution. Our results suggested that summer and winter species of Pleurotus might be evolved at different evolutionary rate.

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Submitted

2019-07-25

Published

2019-08-03

Issue

Vol. 28 No. 1 (2019)

Section

Articles

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How to Cite

Barh, A., Sharma, V. P., Kamal, S., Shirur, M., Annepu, S. K., Kumar, A., & Upadhyay, R. C. (2019). Speciation of cultivated temperate and tropical Pleurotus species –an in silico prediction using conserved sequences. Mushroom Research, 28(1). https://epubs.icar.org.in/index.php/MR/article/view/91990