Genetic variability, heritability, and diversity analysis in short day tropical onion (Allium cepa)
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Keywords:
Euclidean distance, GCV, Heritability, Onion, PCA, PCV, Ward’s methodAbstract
The main aim of the present investigation was to assess the degree of variability, heritability and genetic advance in onion (Allium cepa L.) using 13 quantitative and four biochemical traits. PCV was higher than GCV for all the traits but the difference was less in plant height, pyruvic acid, leaf length, number of leaves, pseudostem length, pseudostem width, leaf width and total phenols indicating higher contribution of genotypic effect towards phenotypic expression. Highest heritability was observed for plant height, number of leaves, leaf length, leaf width, pseudostemlength, pseudostem diameter, total phenols and pyruvic acid. High heritability along with high genetic advance as percent of mean was recorded in number of leaves, leaf length, leaf width, pseudostem length, pseudostem diameter, total phenols and pyruvic acid indicating the presence of additive gene action for the expression of these traits. Based on Euclidean distance and Ward’s minimum variance, all accessions were clustered into four groups. Cluster I comprised of accessions with highest yield, yield related traits and high pungency. Cluster II was the largest cluster and composed of accessions having highest TSS and dry matter content. Cluster III was the smallest cluster comprising of
accessions having highest polar diameter and total phenols. Cluster IV comprised of accessions having low yielding potential. Five principal components (PC1 to PC5), having latent roots greater than one, accounted for 78.5% total variation. Cluster analysis and Principal component analysis (PCA) were in agreement for assigning genotypes into four clusters. In the first principal component, plant height, leaf length and pseudostem diameter were the most contributing traits, whereas dry matter, total soluble solids (TSS) and pyruvic acid were the principal traits of the second principal component. Based on squared cosine value (Cos2) for variables, average bulb weight, gross yield and marketable yield in positive direction and plant height, leaf length and pseudostem width in negative direction, were the major contributing traits. Squared cosine value (Cos2) for individual factor determined that Superex and Black Gold were the most prominent genotypes contributing towards PCA. This study would provide a better opportunity to select potential genotypes for yield related traits and help breeders in precise selection of promising diverse parents for purposeful heterosis breeding.
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References
Aditika A, Priyanka P, Dod V and Sharma M. 2017. Variability studies in rabi onion (Allium cepa var cepa L) for yield and yield contributing traits. International Journal of Farm Sciences 7(1): 123–6.
Akhtari M, Dashti F, Madadi H and Rondon S. 2014. Evaluation of resistance to onion thrips (Thrips tabaci Lind.) in several Tareh Irani (Persian leek: Allium ampeloprasum Tareh group) landraces. Archives of Phytopathology and Plant Protection 47: 29–41. DOI: https://doi.org/10.1080/03235408.2013.800724
Anthon G E and Barrett D M. 2003. Modified method for the determination of pyruvic acid with dinitrophenylhydrazine in the assessment of onion pungency. Journal of the Science of Food and Agriculture 83(12):1210–3. DOI: https://doi.org/10.1002/jsfa.1525
APEDA. 2017. India export of agro food products. http://agriexchange.apeda.gov.in/indexp/ Product_ description_32head.aspx? gcode=0202. Accessed 9th August 2017.
Arya J S, Singh N, Arya P and Kant A. 2017. Morphological variations and relationship among onion germplasm for quantitative and qualitative traits at trans-Himalaya Ladakh, India. Australian Journal of Crop Science 11(3): 329–37. DOI: https://doi.org/10.21475/ajcs.17.11.03.pne369
Bharti N, Ram R B, Meena M L and Yogita. 2011. Genetic variability studies in onion (Allium cepa L). Annals of Horticulture 4(2): 171–5.
Burton G W and Devane E H. 1953. Estimating heritability in tall fescue (Festuca arundinacea) from replicated clonal material. Agronomy Journal 45(10): 478–81. DOI: https://doi.org/10.2134/agronj1953.00021962004500100005x
Chandrayudu E, Vemena K, Naik B S and Prathyusha C. 2016. Biophysical and biochemical constituents influencing thrips and jassid resistance in groundnut germplasm. Ecological Perspectives 18: 780.
Chattopadhyay A, Sharangi A B, Dutta S, Das S and Denre M. 2013. Genetic relatedness between quantitative and qualitative parameters in onion (Allium cepa L.). Vegetos-An International Journal of Plant Research 26(1): 151–7. DOI: https://doi.org/10.5958/j.2229-4473.26.1.021
Coolong T W, Randle W M and Wicker L. 2008. Structural and chemical differences in the cell wall regions in relation to scale firmness of three onion (Allium cepa L.) selections at harvest and during storage. Journal of the Science of Food and Agriculture 88: 1277–86. DOI: https://doi.org/10.1002/jsfa.3219
Cramer CS. 2001. Comparison of open-pollinated and hybrid onion varieties for New Mexico. Hort Technology 11: 119–23. DOI: https://doi.org/10.21273/HORTTECH.11.1.119
Degewione A, Alamerew S, Tabor G. 2011. Genetic variability and association of bulb yield and related traits in shallot (Allium cepa var. aggregatum Don.) in Ethiopia. International Journal of Agricultural Research 6(7): 517–36. DOI: https://doi.org/10.3923/ijar.2011.517.536
Deshmukh S N, Basu M S and Reddy P S. 1986. Genetic variability, character association and path analysis of quantitative traits in Virginia bunch varieties of ground nut. Indian Journal of Agriculture Sciences 56: 816–21.
Dwivedi M, Jain N and Mishra P. 2017. Studies on genetic variability, heritability and genetic advance in onion (Allium cepa L.) genotypes. Annual Research and Review in Biology 15(5): 1–10. DOI: https://doi.org/10.9734/ARRB/2017/35384
FAOSTAT. (2017). Onion production, area and productivity URL http://faostat3.fao.org/browse/Q/QC/E. Accessed 6th September 2017.
Fehr W R. 1987. Heritability. Principles of Cultivar Development, 1, pp 95–105.
Galmarini C R, Goldman I L and Havey M J. 2001. Genetic analyses of correlated solids, flavor, and health-enhancing traits in onion (Allium cepa L.). Molecular Genetics and Genomics 265: 543–51. DOI: https://doi.org/10.1007/s004380100445
Hamdi A, El-Ghareib A A, Shafey S A and Ibrahim M A M. 2003. Genetic variability, heritability, and expected genetic advance for earliness and seed yield from selection in lentil. Egypt Journal of Agriculture Research 81: 125–37. DOI: https://doi.org/10.21608/ejar.2003.276089
Hanci F and Gokce A F. 2016. Genetic diversity evaluations in Turkish onion (Allium cepa L.) genotypes: principal component analyses (PCA) for breeding strategies. Acta Horticulturae 1143: 227–34. DOI: https://doi.org/10.17660/ActaHortic.2016.1143.33
Jaime L, Martínez F, Martín Cabrejas M A, Molla E, López Andréu F J, Waldron K W and Esteban R M. 2001. Study of total fructan and fructooligosaccharide content in different onion tissues. Journal of the Science of Food and Agriculture 81: 177–82. DOI: https://doi.org/10.1002/1097-0010(20010115)81:2<177::AID-JSFA796>3.0.CO;2-9
Johnson, H W, Robinson H F and Comstock R E. 1955. Estimates of genetic and environmental variability in soybeans. Agronomy Journal 47: 314–8. DOI: https://doi.org/10.2134/agronj1955.00021962004700070009x
Kandakoor S B, Khan H K, Chakravarthy A K, Kumar C T and Venkataravana P. 2014. Biochemical constituents influencing thrips resistance in groundnut germplasm. Journal of Environmental Biology 35: 675–81.
Khar A and Saini N. 2016. Limitations of PCR-based molecular markers to identify male-sterile and maintainer plants from Indian onion (Allium cepa L.) populations. Plant Breeding 135: 519–24. DOI: https://doi.org/10.1111/pbr.12373
Khosa J S and Dhatt A S. 2013. Studies on genetic variability and heritability in bulb onion (Allium cepa L.) in North-Western plains of India. Journal of Horticultural Science 8(2): 255–8.
Khosa J S and Dhatt A S. 2015. Genetic diversity for morphological and biochemical traits in bulb onion. Indian Journal of Horticulture 72(1): 143–6. DOI: https://doi.org/10.5958/0974-0112.2015.00027.4
Kik C, Wietsma W A and Verbeek W H J. 1998. Onion. Hybrid Cultivar Development: Concepts and Methodologies, pp 476- 85. Banga S S and Banga S K (Eds.). Narosa Publ. House, New Delhi. DOI: https://doi.org/10.1007/978-3-662-07822-8_21
Larsen T, Saxena A, Cramer C S. 2009. Relatedness of bulb firmness to other attributes of New Mexico onion entries. International Journal of Vegetable Science 15: 206–17. DOI: https://doi.org/10.1080/19315260902727742
Mallor Giménez C, Carravedo Fantova M, Estopañán Muñoz G and Mallor Giménez, F. 2011. Characterization of genetic resources of onion (Allium cepa L.) from the Spanish secondary centre of diversity. Spanish Journal of Agricultural Research 9(1): 144–55. DOI: https://doi.org/10.5424/sjar/20110901-149-10
Mohanty B K. 2004. Genetic variability and path analysis in onion. Indian Journal of Agricultural Research 38(1): 65–8.
Murtagh F and Legendre P. 2014. Ward's hierarchical agglomerative clustering method: which algorithms implement Ward's criterion? Journal of Classification 31(3): 274–95. DOI: https://doi.org/10.1007/s00357-014-9161-z
Nieuwhof M, De Bruyn J W and Garretsen F. 1973. Methods to determine solidity and dry matter content of onions (Allium cepa L.). Euphytica 22(1): 39–47. DOI: https://doi.org/10.1007/BF00021554
Njau, G M, Nyomora A M, Dinssa F F, Chang J C, Malini P, Subramanian S and Srinivasan R. 2017. Evaluation of onion (Allium cepa) germplasm entries for resistance to onion thrips, Thrips tabaci (Lindeman) in Tanzania. International Journal of Tropical Insect Science 37: 98–113. DOI: https://doi.org/10.1017/S1742758417000078
Nunes R L C, Oliveira A B D and Dutra A S. 2014. Agronomic performance of onion hybrids in Baraúna, in the semi-arid region of Brazil. Revista Ciência Agronômica 45: 606–11. DOI: https://doi.org/10.1590/S1806-66902014000300023
R Core Team. 2014. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. URL http://www.R-project.org/.
Rivera A, Mallor C, Garcés-Claver A, García-Ulloa A, Pomar F and Silvar C. 2016. Assessing the genetic diversity in onion (Allium cepa L.) landraces from northwest Spain and comparison with the European variability. New Zealand Journal of Crop and Horticultural Science 44(2): 103–20. DOI: https://doi.org/10.1080/01140671.2016.1150308
Santra P, Manna D, Sarkar H K and Maity T K. 2017. Genetic variability, heritability and genetic advance in kharif onion (Allium cepa L.). Journal of Crop and Weed 13(1): 103–6.
Singh B. 2001. Plant Breeding: Principles and Methods, 6th ed. Kalyani Publishers, New Delhi, India.
Singh R K and Bhonde S R. 2011. Performance studies of exotic onion (Allium cepa L.) hybrids in the Nashik region of Maharashtra. Indian Journal of Hill Farming 24: 29–31.
Singh S R, Ahmed N, Lal S, Ganie S A, Amin M, Jan N and Amin A. 2013. Determination of genetic diversity in onion (Allium cepa L.) by multivariate analysis under long day conditions. African Journal of Agricultural Research 8(45): 5599–606.
Singleton V L and Rossi J A. 1965. Colorimetry of total phenolics with phosphomolybdic-phosphotungstic acid reagents. American Journal of Enology and Viticulture 16(3): 144–58.
Solanki P, Jain P K, Prajapati S, Raghuwanshi N, Khandait R N and Patel S. 2015. Genetic analysis and character association in different genotypes of onion (Allium cepa L.). International Journal of Agriculture, Environment and Biotechnology 8: 783–93. DOI: https://doi.org/10.5958/2230-732X.2015.00087.X
Trivedi A P, Dhumal K N and Lawande K E. 2006. Estimates of heritability, genetic advance and correlation between yield and its components in onion (Allium cepa L.). Indian Journal of Genetics and Plant Breeding 66(1): 59–60.
Vågen I M and Slimestad R. 2008. Amount of characteristic compounds in 15 cultivars of onion (Allium cepa L.) in controlled field trials. Journal of the Science of Food and Agriculture 88: 404–11. DOI: https://doi.org/10.1002/jsfa.3100
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