Phylogenetic analysis and secondary structure prediction for drought tolerant Cap binding proteins of plant species


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Authors

  • JYOTIKA BHATI
  • PAVAN K CHADUVULA
  • SANJEEV KUMAR
  • ANIL RAI

Keywords:

Cap binding proteins, Drought tolerance, Phylogenetic analysis, Secondary structure prediction

Abstract

Cap binding proteins play an important role in improvement of drought tolerant varieties. Fifteen drought tolerant
Cap binding proteins from different plant species were phylogenetically analysed and their secondary structure were
predicted. On the rectangular cladogram (Mirabilis jalapa) was nearest to the origin and is placed separately with Ricinus
communis forming separate cluster. The Cap binding proteins of Nicotiana tabacum were closely related with that of
Solanum tuberosum, showing their orthologous behaviour. Random coils constituted the maximum coverage along the
entire length is a common trend in 14 drought tolerant proteins, irrespective of size and species family.

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Author Biographies

  • JYOTIKA BHATI
    Research Associate, Indian Agricultural Statistics Research Institute, New Delhi 110 012

  • PAVAN K CHADUVULA
    Research Associate, Indian Agricultural Statistics Research Institute, New Delhi 110 012

  • SANJEEV KUMAR
    Scientist (Senior Scale),Indian Agricultural Statistics Research Institute, New Delhi 110 012



  • ANIL RAI
    Head & Principal Scientist, Centre for Agricultural Bioinformatics, Indian Agricultural Statistics Research Institute, New Delhi 110 012


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Issue

Vol. 83 No. 1 (2013)

Section

Articles

License

The copyright of the articles published in The Indian Journal of Agricultural Sciences is vested with the Indian Council of Agricultural Research, which reserves the right to enter into any agreement with any organization in India or abroad, for reprography, photocopying, storage and dissemination of information. The Council has no objection to using the material, provided the information is not being utilized for commercial purposes and wherever the information is being used, proper credit is given to ICAR.

How to Cite

BHATI, J., CHADUVULA, P. K., KUMAR, S., & RAI, A. (2013). Phylogenetic analysis and secondary structure prediction for drought tolerant Cap binding proteins of plant species. The Indian Journal of Agricultural Sciences, 83(1). https://epubs.icar.org.in/index.php/IJAgS/article/view/27205