MORPHOLOGICAL AND MOLECULAR CHARACTERIZATION OF Ustilaginoidea virens TIRUPATI ISOLATE CAUSING FALSE SMUT IN RICE (Oryza sativa L.)


183 / 247

Authors

  • K. SRIKANTH Department of Molecular Biology and Biotechnology, S. V. Agricultural College, Acharya N.G. Ranga Agricultural University, Tirupati -517 502
  • Y. AMARAVATHI Department of Molecular Biology and Biotechnology, S. V. Agricultural College, Acharya N.G. Ranga Agricultural University, Tirupati -517 502
  • T. RAJASEKHARAM S. V. Agricultural College, Acharya N.G. Ranga Agricultural University, Tirupati -517 502

https://doi.org/10.58537/jorangrau.2023.51.2.02

Keywords:

RFS, NCBI, ITS, Ustilaginoidea virens

Abstract

Rice false smut disease, an emerging threat to rice cultivation worldwide due to its detrimental effects on both grain yield and quality. The study was conducted on characterization of rice false smut fungus viz., U. virens Tirupati isolate in the year 2020-21. It has white coloured fluffy, compact and leathery mycelium with slight undulations and orange or yellowish chlamydospores. The U.virens Tirupati isolate was molecular characterized by sequencing ITS amplicon of 439 bp (GenBank accession number ON987217.1). The phylogenetic analysis revealed that U. virens Tirupati isolate was different from other strains such as MAFF 240994, strain iJS62, strain UV-8b, strain P1, Ustilaginoidea usambarensis and it formed a separate cluster with Ustilaginoidea virens sy1.

References

Ashizawa, T., Takahashi, M., Moriwaki, J and

Hirayae, K. 2010. Quantification of the rice

false smut pathogen Ustilaginoidea virens

from soil in Japan using real-time

PCR. European Journal of Plant Pathology.

:221-232.

Atia, M. M. M. 2004. Rice false smut

(Ustilaginoidea virens) in Egypt. Journal of

Plant Diseases and Protection. 111: 71-82.

Baite, M. S and Sharma, R. 2015. Isolation

technique and culture conditions of false

smut pathogen (Ustilaginoidea virens) on

rice. Indian Phytopathology.68(1): 50-55.

Baite, M.S., Sharma, R.K., Devi, T.P., Sharma,

Prathiba and Kamil, Deeba. 2014.

Morphological and molecular

characterization of Ustilaginoidea virens

isolates causing false smut of rice in India.

Indian Phytopathology. 67(3): 222-227.

Banasode, M and Hosagoudar, G.N. 2020.

Studies on cultural and morphological

characteristics of Ustilaginoidea virens

(Cooke) in hilly and coastal zones of

Karnataka. International Journal of

Agriculture Sciences. 12: 9715-9718.

Fig. 8. Phylogenetic analysis of seven Ustilaginoidea virens isolates with MEGA 11

software

CHARACTERIZATION OF U. virens TIRUPATI ISOLATE CAUSING FALSE SMUT IN RICE

Begerow, D., Nilsson, H., Unterseher, M and

Maier, W. 2010. Current state and

perspectives of fungal DNA barcoding

and rapid identification procedures. Applied

Microbiology and Biotechnology. 87: 99-

Centre for Biodiversity Genomics, University of

Guelph. 2021. The Global Taxonomy

Initiative 2020: A Step-by-Step Guide for

DNA Barcoding. Technical Series No. 94.

Secretariat of the Convention on Biological

Diversity, Montreal. pp. 66.

Cooke, M. C. 1878. Some extra European fungi.

Grevillea. 7:13-15.

Haiyong, H., Wongkaew, S., Jie, Y., Xuehui, Y.,

Xiaojun, C., Shiping, W., Qigqun,

T.,Lishuang, W., Sompong, M and

Buensanteai, N. 2015. Biology and artificial

inoculation of Ustilaginoidea virens

(Cooke) Takahashi in rice. African Journal

of Microbiology Research. 9(11): 821-830.

Hollingsworth, P.M. 2007. DNA barcoding:

potential users. Genomics, Society, and

Policy. 3(2):44-47.

Kim, K. W and Park, E. W. 2007. Ultrastructure

of spined conidia and hyphae of the rice

false smut fungus Ustilaginoidea virens.

The International Research and Review

Journal for Microscopy 38(6): 626-631.

Ladhalakshmi, D., Laha, G., Singh, R.,

Karthikeyan, A., Mangrauthia, S.,

Sundaram, R., Thukkaiyannan, P and

Viraktamath, B. 2012. Isolation and

characterization of Ustilaginoidea virens

and survey of false smut disease of rice in

India. Phytoparasitic. 40(2): 171-176.

Lin, X., Bian, Y., Mou, R., Cao, Z., Cao, Z., Zhu, Z

and Chen, M. 2018. Isolation, identification,

and characterization of Ustilaginoidea

virens from rice false smut balls with high

ustilotoxin production potential. Journal of

Basic Microbiology. 58(8):670-678.

Rani, R.I.T.U., Sharma, V.K., Lore, J.S and Pannu,

P.P.S. 2015. Cultural studies on

Ustilaginoidea virens, the incitant of false

smut of rice (Oryza sativa). Indian Journal

of Agricultural Sciences. 85: 28-31.

Rush, M.C., Shahjahan, A.K.M., Jones, J.P and

Groth, D.E. 2000. Outbreak of false smut

of rice in Louisiana. Plant Disease. 84(1):

-100.

Saha, M., Chakraborty, A and Bhattacharya, K.

Aerobiology, epidemiology and

disease forecasting of false smut disease

of rice in West Bengal state,

India. Aerobiologia. 36:299-304.

Schocha, C.L., Seifertb, K.A., Huhndorfc, S.,

Robertd, V., Spougea, J.L., Levesqueb,

C.A., Chenb, W and Consortiuma, F.B.,

Nuclear ribosomal internal

transcribed spacer (ITS) region as a

universal DNA barcode marker for

Fungi. PNAS. 109(16): 6241-6246.

Shivamurthy, P. 2017. Studies on false smut of

rice caused Ustilaginoidea virens (Cke.)

Tkh (Doctoral dissertation, M.Sc. Thesis

submitted to University of Agricultural

Sciences , Raichur, Karnataka, India.

Singh, A.K and Pophaly, D.J. 2010. An unusual DOI: https://doi.org/10.1002/ejic.200900669

rice false smut epidemic reported in

Raigarh District, Chhattisgarh,

India. International Rice Research

Notes. 35:1-3.

SRIKANTH et al.

Tanaka, E., Ashizawa, T., Sonoda, R and Tanaka,

C. 2008. Villosiclava virens gen. nov.,

comb. nov., the teleomorph of

Ustilaginoidea virens, the causal agent of

rice false smut. Mycotaxon. 106(1): 491-

Wu, Z.H., Wang, T.H., Huang, W And Qu Y.B.

A simplified method for chromosome

DNA preparation from filamentous Fungi.

Mycosystema. 20: 575-577.

Zhang, J., Chen, Z., Zhang, B., Liu, Y and Lu, F.

Study on morphology of

Ustilaginoidea virens. Acta

Phytopathologica Sinica. 33(6): 517-523.

Zhou, Y.L., Pan, Y.J., Xie, X.W., Zhu, L.H., Xu, J.L.,

Wang, S and Li, Z.K. 2008. Genetic

diversity of rice false smut fungus,

Ustilaginoidea virens and its pronounced

differentiation of populations in North

China. Journal of Phytopathology. 156(9):

-564.

Downloads

Submitted

06-07-2023

Published

30-06-2023

How to Cite

K. SRIKANTH. (2023). MORPHOLOGICAL AND MOLECULAR CHARACTERIZATION OF Ustilaginoidea virens TIRUPATI ISOLATE CAUSING FALSE SMUT IN RICE (Oryza sativa L.) (Y. AMARAVATHI & T. RAJASEKHARAM, Trans.). The Journal of Research ANGRAU, 51(2), 15-25. https://doi.org/10.58537/jorangrau.2023.51.2.02