ELUCIDATION OF RICE ADVANCED BREEDING LINES (F6 GENERATION) FOR GENETIC DIVERSITY THROUGH PRINCIPAL COMPONENT AND HIERARCHICAL CLUSTERING ANALYSIS


245 / 209

Authors

  • K.AMARNATH Regional Agricultural Research Station, Nandyal-518502 Acharya N.G. Ranga Agricultural Uni
  • B.N.V.S.R.RAVI KUMAR Regional Agricultural Research Station, Nandyal-518502 Acharya N.G. Ranga Agricultural Uni

https://doi.org/10.58537/jorangrau.2025.53.4.04

Keywords:

Correlation, Genetic diversity, Hierarchical cluster analys, Principal component analysis, Rice.

Abstract

The current study aimed to evaluate 200 advanced breeding lines along with three checks during kharif,2024 to delineate the extent of genetic  diversity for yield and its component trait using multivariate techniques using Principal Component  Analysis (PCA), Hierarchical clustering and correlation. In PCA, the principal components having eigen values greater than one viz., PC1, PC2, PC3,PC4 and PC5 detailing 20.3%, 16.7%, 14%, 12.8% and 12.7% respectively with
a cumulative effect of 76.7% of the total variation. Based upon Wards method of hierarchical clustering, 200 rice advanced breeding lines along with three checks were divulged into 14 clusters based on different traits studied, in which cluster I topped with 30 advanced breeding  lines followed by cluster XIII and VI with 29 and 25 advanced  breeding lines, respectively. The advanced breeding linesconfined to cluster X registered higher cluster mean values for grain yield. Besides, cluster XIV showed  highest values for panicle length, ear bearing  tillers/m2  and grains per panicle. The trait grain yield registered positive association with days to 50 % flowering, days to maturity, ear bearing tillers/m2, grains per panicle and test weight through correlation analysis.
From the present study, the advanced breeding lines viz., NDRA 78, NDRA 225, NDRA 226, NDRA 227 and NDRA 50 were identified as genetically potential advanced breeding lines for commercial exploitation for enhancing yield and component traits in rice.

References

1. Edukondalu, B., Reddy, V.R., Rani, T.S.,

2. Kumari, C.A. and Soundharya, B., 2024.

3. Assessment of variation in rice maintainer

4. lines using principal component

5. analysis. Electronic Journal of Plant

6. Breeding, 15(1): 270-276.

7. Fathima M.A, Geetha S, Amudha K, Uma

8. D.2021. Genetic variability, frequency

9. distribution and association analysis in

10. ADT (R) 48 x Kavuni derived F2

11. population of rice (Oryza sativa L.).

12. Electronic Journal of Plant Breeding,

13. 12(3):659-666

14. Howlader, N.C., Bulbul, M.T.A., Islam, M.Z.,

15. Arafat, E., Rana, M.S. and Hasan, M.Z.,

16. 2025. Assessing rice genotypes based

17. on agro-morphological characterization

18. and diversity analysis in southern

19. Bangladesh. Discover Plants, 2(1): 1-19.

20. Kusuma Kumari, B., Ravi Kumar, B.R., Jyothula,

21. D.P.B. and Rao, N.M. 2021. Diversity

22. analysis in rice breeding lines for yield

23. and its components using principal

24. 40

25. ELUCIDATION OF RICE ADVANCED BREEDING LINES (F6

26. GENERATION) FOR GENETIC DIVERSITY

27. component analysis. Journal of

28. Pharmacognosy& Phytochemistry, 10(1):

29. 905-909.

30. Mondal, S., Pradhan, P., Das, B., Kumar, D.,

31. Paramanik, B., Yonzone, R., Barman, R.,

32. Saha, D., Karforma, J., Basak, A. and

33. Dey, P., 2024. Genetic characterization

34. and diversity analysis of indigenous

35. aromatic rice. Heliyon, 10(10).

36. Paramanik, S., Panda, K.K., Rao, M.S., Jaishi,

37. A. and Pati, A.K., 2025. Unlocking the

38. genetic diversity and principal

39. component analysis of selected rice

40. (Oryza sativa L.) genotypes using

41. physical and biochemical

42. characteristics. Plant Molecular Biology

43. Reporter, 1-15.

44. Pavan Kumar, G.K., Durga Prasad, A.V.S and

45. Reddy, C.V.C.M. 2019. Hierarchical

46. cluster analysis for yield and nutritional

47. traits in elite foxtail millet genetic

48. resources [Setaria italica (L.)

49. Beauv.].International Journal of

50. Innovative Science and Research

51. Technology, 4(7): 1253-1257.

52. Ratnam,V.T., Ravi Kumar, B., Rao, L.V.,

53. Srinivas, T. and Kumar, A.A. 2022.

54. Principal component analysis of yield and

55. quality traits in Zinc rich landraces of

56. rice (Oryza sativa L.). Electronic Journal

57. of Plant Breeding, 13(4): 1162-1169.

58. Ravi Kumar, B.N.V.S.R., Kumari, P.N., Rao,

59. P.V.R., Rani, M.G., Satyanarayana, P.V.,

60. Chamundeswari, N., Vishnuvardhan,

61. K.M., Suryanarayana, Y., Bharatha

62. lakshmi, M. and Reddy, A.V. 2015.

63. Principal component analysis and

64. character association for yield

65. components in rice (Oryza sativa L.)

66. cultivars suitable for irrigated ecosystem.

67. Current Biotica, 9(1): 25-35. Ricepedia,

68. 2025. Rice as food. http://ricepedia.org/

69. rice-as-food

70. Roy, T.K., Sannal, A., Tonmoy, S.S., Akter, S.,

71. Roy, B., Rana, M.M., Alam, Z. and Hasan,

72. M.R., 2024. Trait analysis of short

73. duration boro rice (Oryza sativa L.)

74. varieties in northern region of

75. Bangladesh: insights from heatmap,

76. correlation and PCA. Nova

77. Geodesia, 4(2):175-175.

78. Sudeepthi, K., Srinivas, T., Ravi Kumar,

79. B.N.V.S.R., Jyothula, D.P.B. and Umar,

80. S.N. 2020a. Genetic divergence studies

81. for anaerobic germination traits in rice

82. (Oryza sativa L.). Current Journal of

83. Applied Science and Technology, 39(1):

84. 71-78.

85. Sudeepthi, K., Srinivas, T., Ravi Kumar,

86. B.N.V.S.R., Jyothula, D.P.B. and Umar,

87. S.N. 2020b. Assessment of genetic

88. variability, character association and

89. path analysis for yield and yield

90. component traits in rice Oryza sativa

91. L. Electronic Journal of Plant

92. Breeding, 11 (01): 144-148.

93. Vasudeva Reddy, D., Suneetha, Y., Ravi Kumar,

94. B.N.V.S R. and Ramesh, D. 2023.

95. Evaluation of experimental hybrids for

96. yield and yield component traits in Rice

97. (Oryza sativa L.). The Andhra Agricultural

98. Journal, 70 (1): 050-061.

99. Vijay Kumar, R., Ravi Kumar, B.N.V.S.R.,

100. Amarnath, K., Kavitha, G., Nageshwara

101. Reddy,A.V., Vishnuvardhan, K.R., Divya

102. Mani, B., Venkateswarlu, N.C. 2024.

103. Genetic insights into yield potential in

104. advanced rice cultures: A multivariate

105. analysis of yield components.

106. International Journal of Research in

107. Agronomy, 7(9S):100-104.

Downloads

Published

13-05-2026

How to Cite

K.AMARNATH, & B.N.V.S.R.RAVI KUMAR. (2026). ELUCIDATION OF RICE ADVANCED BREEDING LINES (F6 GENERATION) FOR GENETIC DIVERSITY THROUGH PRINCIPAL COMPONENT AND HIERARCHICAL CLUSTERING ANALYSIS. The Journal of Research ANGRAU, 53(4), 31-41. https://doi.org/10.58537/jorangrau.2025.53.4.04