Yak introgression into Tibetan Yellow cattle: evidences from mitochondrial DNA D-loop sequence analysis and β-lactoglobulin genetic variants


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Authors

  • Zhengxin Liu Southwest University for Nationalities, Chengdu 610041 P R China
  • Bangmin Lu Southwest University for Nationalities, Chengdu 610041 P R China
  • Yongjiang Mao Southwest University for Nationalities, Chengdu 610041 P R China
  • Yuping Li Southwest University for Nationalities, Chengdu 610041 P R China
  • Suyu Jin Southwest University for Nationalities, Chengdu 610041 P R China
  • Yucai Zheng Southwest University for Nationalities, Chengdu 610041 P R China

https://doi.org/10.56093/ijans.v82i9.23657

Keywords:

ß-lactoglobulin, Gene introgression, mtDNA D-loop, Tibetan Yellow cattle, Yak

Abstract

The objective of this study was to investigate the possible introgression of highland yak (Bos grunniens) into Tibetan Yellow cattle (Bos taurus) based on milk protein and mtDNA D-loop analysis. Tibetan Yellow cattle (43) were used to assay polymorphisms of β-lactoglobulin (β-Lg) and to extract genomic DNA for the PCR amplification of mtDNA D- loop. Native polyacrylamide gel electrophoresis (PAGE) of milk β-Lg showed that 3 milk samples exhibited the yak- specific β-Lg E variant among the 43 milk samples tested. mtDNA D-loop sequences were successfully amplified by PCR using genomic DNA extracted from milk. A total of 16 sequences of the mtDNA D-loop were obtained for analysis, which contained 133 variable sites (97 parsimony-informative sites and 36 single sites) and defined 15 different haplotypes. The 3 Tibetan Yellow cattle carrying β-Lg E variant were exactly clustered with yak when mtDNA D-loop sequences were employed for cluster analysis, while other yaks assayed (13) clustered with cattle. This research demonstrated that there existed matrilineal introgression of yak during the evolution or natural breeding of Tibetan Yellow cattle population on Qinghai-Tibet plateau.

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References

Amills M, Francino O, Jansa M and Sanchez A. 1997. Isolation of genomic DNA from milk samples by using Chelex resin. Journal of Dairy Research 64: 231–38.

Berthouly C, Maillard J C, Doan L P, Van T N, Bed’Hom B, Leroy G, Thanh H H, Laloë D, Bruneau N, Chi C V, Dang V N, Verrier E and Rognon X. 2010. Revealing fine scale subpopulation structure in the Vietnamese H’mong cattle breed for conservation purposes. BMC Genetics 11: 45, doi: 10.1186/ 1471–2156–11–45.

Blancher A, Bonhomme M, Crouau-Roy B, Terao K, Kitano T and Saitou N. 2008. Mitochondrial DNA sequence phylogeny of 4 populations of the widely distributed cynomolgus macaque (Macaca fascicularis fascicularis). Journal of Heredity 99: 254– 64.

Cozzi M C, Strillacci M G, Valiati P, Bighignoli B, Cancedda M and Zanotti M. 2004. Mitochondrial D-loop sequence variation among Italian horse breeds. Genetics, Selection, Evolution 36: 663–72.

Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783–91.

Ginja C, Penedo M C T, Sobral M F, Matos J, Borges C, Neves D, Rangel-Figueiredo T and Cravador A. 2010. Molecular genetic analysis of a cattle population to reconstitute the extinct Algarvia breed. Genetics, Selection, Evolution 42: 18, doi: 10.1186/1297– 9686–42–18.

Grossi S F, Lui J F, Garcia J E and Meirelles F V. 2006. Genetic diversity in wild (Sus scrofa scrofa) and domestic (Sus scrofa domestica) pigs and their hybrids based on polymorphism of a fragment of the D-loop region in the mitochondrial DNA. Genetics and Molecular Research 5: 564–68.

Halbert N D and Derr J N. 2007. A comprehensive evaluation of cattle introgression into US federal Bison herds. Journal of Heredity 98: 1–12.

Jia S, Zhou Y, Lei C, Yao R, Zhang Z, Fang X and Chen H. 2010. A new insight into cattle’s maternal origin in six Asian countries. Journal of Genetics and Genomics 37:173–80.

Kumar S, Nagarajan M, Sandhu J S, Kumar N and Behl V. 2007. Phylogeography and domestication of Indian river buffalo. BMC Evolutionary Biology 7: 186 doi:10.1186/1471– 2148–7–186.

Kumar S, Tamura K and Nei M. 2004. MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5: 150–63.

Kuss A W, Gogol J and Geidermann H. 2003. Associations of polymorphic AP–2 binding site in the 52 -flanking region of the bovine beta-lactoglobulin gene with milk proteins. Journal of Dairy Science 86: 2213–18.

Loftus R T, MacHugh D E, Bradley D G, Sharp P M and Cunningham P. 1994. Evidence for two independent domestications in cattle. Proceedings of the National Academy of Sciences of the United States of America 91: 2757–61.

Lum L S, Dovc P and Medrano J F. 1997. Polymorphisms of bovine beta-lactoglobulin promoter and differences in the binding affinity of activator protein-2 transcription factor. Journal of Dairy Science 80: 1389–97.

Medrano J F and Sharrow L. 1989. Milk protein typing of bovine mammary gland tissue used to generate a complementary deoxyribonucleic acid library. Journal of Dairy Science 72: 3190–96.

Mirol P M, Giovambattista G, Lirón JP and Dulout F N. 2003. African and European mitochondrial haplotypes in South American Creole cattle. Heredity 91: 248–54.

Rozas J, Snchez-DelBarrio J C, Messeguer X and Rozas R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496–97.

Tsiaras A M, Bargouli G G, Banos G and Boscos C M. 2005. Effect of kappa-casein and beta-lactoglobulin loci on milk production traits and reproductive performance of Holstein cows. Journal of Dairy Science 88: 327–34.

Wu J M, Smith R K, Freeman A E, Beitz D C, McDaniel B T and Lindberg G L. 2000. Sequence heteroplasmy of D-loop and rRNA coding regions in mitochondrial DNA from Holstein cows of independent maternal lineages. Biochemical Genetics 38: 323–35.

Yu Y, Nie L, He Z Q, Wen J K, Jian C S and Zhang Y P. 1999. Mitochondrial DNA variation in cattle of South China: origin and introgression. Animal Genetics 30: 245–50.

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Submitted

2012-09-11

Published

2012-09-11

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Articles

How to Cite

Liu, Z., Lu, B., Mao, Y., Li, Y., Jin, S., & Zheng, Y. (2012). Yak introgression into Tibetan Yellow cattle: evidences from mitochondrial DNA D-loop sequence analysis and β-lactoglobulin genetic variants. The Indian Journal of Animal Sciences, 82(9), 1012–1015. https://doi.org/10.56093/ijans.v82i9.23657
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