Polymorphism in the promoter region of HSP70 gene and its association with performance traits in Deoni cattle
Abstract views: 50 / PDF downloads: 70
https://doi.org/10.56093/ijans.v86i12.66043
Keywords:
Deoni cattle, HSP70, PCR-SSCP, Polymorphism, Reproductive traitsAbstract
A study was undertaken to analyze associations between HSP70 genetic variants of promoter region with heat tolerance and performance in Deoni (Bos indicus) cattle using PCR-SSCP technique. The analysis revealed three SSCP patterns, viz. AA, AB and BB with frequencies of 0.712, 0.254 and 0.034, respectively. Sequence analysis of representative samples of each pattern showed 7 SNPs, which included four transitions (A859G, A1046G, C1257T and G1294A) and 3 transversions (A897C, A1127C and G1166T). Cows with different SSCP patterns showed similar production and reproduction performances. The studies on physiological parameters and calculation of Heat tolerance coefficient (HTC) of individual cows indicated that Deoni cows maintained at Bengaluru were not under heat stress even after 6 h of exposure to sun during summer (March to May).
Downloads
References
Banks A, Looper M L, Reiter S, Starkey L, Flores R, Hallford D and Rosenkrans C Jr. 2007. Identification of single nucleotide polymorphisms within the promoter region of the bovine heat shock protein 70 gene and associations with pregnancy. American Society Animal Science Southern Section Meeting 85: 10.
Barani A, Ramesha K P, Basavaraju M, Akhila Rao and Narasimha Rao T V L. 2015. Genetic characterization and identification of single nucleotide polymorphisms of ATP1A1 gene in Indian humped cattle. Indian Journal of Animal Research 10.8805/ ijar.7082 DOI: https://doi.org/10.18805/ijar.7082
Beatty D T, Barnes A, Taylor E, Pethick D, McCarthy M and Maloney S K. 2006. Physiological responses of Bos taurus and Bos indicus cattle to prolonged, continuous heat and humidity. Journal of Animal Science 84: 972–85. DOI: https://doi.org/10.2527/2006.844972x
Bernabucci U, Lacetera N, Baumgard L H, Rhoads R P, Ronchi B and Nardone A. 2010. Metabolic and hormonal acclimation to heat stress in domesticated ruminants. Animal 7: 1167–83. DOI: https://doi.org/10.1017/S175173111000090X
Board P J, Roberts J and Evans. 2009. The genetic control of erythrocyte reduced glutathione in Australian merino sheep. Journal of Agriculture Science 82: 395–98. DOI: https://doi.org/10.1017/S0021859600051261
Charles R Jr, Andrea B, Sara R and Michael L. 2010. Calving traits of crossbred Brahman cows are associated with heat shock protein, genetic polymorphisms. Animal Reproduction Science 119: 178–82.
Collier R J, Collier J L, Rhoads R P and Baumgard L H. 2008. Genes involved in the bovine heat stress response. Journal of Dairy Science 91: 445–54. DOI: https://doi.org/10.3168/jds.2007-0540
Freitas M S, Misztal I, Bohmanova J and West J. 2006. Utility of On- and Off-farm weather records for studies in genetics of heat tolerance. Livestock Science 105: 223–28. DOI: https://doi.org/10.1016/j.livsci.2006.06.011
Hall T A. 1999. Bio-edit a user-friendly biological sequence alignment editor and analysis program for windows 95/98/ NT. Nucleic Acids Symposium Series 41: 95–98.
Miller S A, Dykes D D and Polesky H F. 1988. A sample salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Research 16: 1215. DOI: https://doi.org/10.1093/nar/16.3.1215
Ramesha K P, Basavaraju M, Akhila Rao, Geetha G R, Kataktalware M A and Jeyakumar S. 2015. Single nucleotide polymorphism identification and characterization of GnRHR gene in Bos taurus and Bos indicus cattle. Turkish Journal of Veterinary and Animal Sciences 39: 10–15. DOI: https://doi.org/10.3906/vet-1310-47
Rhoad A O. 1944. The Iberia heat tolerance test for cattle. Journal of Tropical Agriculture 21: 162–64.
Rosenkrans C, Banks A, Reiter S and Looper M. 2010. Calving traits of crossbred Brahman cows are associated with heat shock protein70 genetic polymorphisms. Animal Reproduction Science 119: 178–82. DOI: https://doi.org/10.1016/j.anireprosci.2010.02.005
Sambrook J and Russell D W. 2001. Molecular Cloning. A Laboratory Manual. 3rd ed. Cold Spring Harbor, NY, USA. Cold Spring Laboratory Press.
Downloads
Submitted
Published
Issue
Section
License
Copyright (c) 2016 The Indian Journal of Animal Sciences
This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.
The copyright of the articles published in The Indian Journal of Animal Sciences is vested with the Indian Council of Agricultural Research, which reserves the right to enter into any agreement with any organization in India or abroad, for reprography, photocopying, storage and dissemination of information. The Council has no objection to using the material, provided the information is not being utilized for commercial purposes and wherever the information is being used, proper credit is given to ICAR.