Study of effect of various temperatures on the abundance of ammonia oxidizing archaea and bacteria
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Keywords:
Ammonia, amoA gene, Archaea, Bacteria, Recirculating system, TemperatureAbstract
Temperature plays significant role in the oxidation of ammonia in filtration units of recirculating aquaculture system. The impact of temperature on the abundance of ammonia oxidizing archaea and bacteria, and the expression of ammonia oxidizing gene (amoA) at specific temperature was evaluated. The broken earthen pot pieces used as filter bed materials of recirculating system, showing the presence of microorganisms were introduced in glass containers (5 pieces/5l) filled with synthetic wastewater and exposed to four different temperatures of 10, 20, 30 and 40°C for 40 days. The ammonia oxidation rate was minimum at 10°C. In 20, 30 and 40°C treatments, 99% ammonia was reduced on day-18, 8 and 18, respectively compared to the initial day. Fresh ammonium chloride (2 mM) was added twice to maintain the ammonia concentration in all treatments, except 10°C one. Nitrite-N level was < 1 mg/l at 10°C. The level was highest on day-22 at 20° and 40°C and on day-12 at 30°C. The nitrification was 10 days delayed at 20°C and 40°C compared to 30°C treatment. Concentration of nitrate-N was lowest at 10°C. Highest concentration of nitrate-N was observed on day-40 at 20°C and 40°C and day-26 at 30°C. Highest copy number of bacterial amoA was recorded at 30°C (2.59×107) followed by 20°C (4.08×106), 40°C (1.45×106) and 10°C (5.664×103). Archaeal amoA was highest at 30°C (7.47×103) followed by 40°C (2.98×102) and 20°C (46.8) treatments. Hence it may be concluded that 30°C temperature was optimum for the efficient and faster oxidation of ammonia in the present recirculating system.
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References
American Public Health Association. 2012. Standard Methods for the Examination of Water and Wastewater, pp. 4.120–23. American Public Health Association, Washington, DC.
Avrahami S, Jia Z, Neufeld J D, Murrell J C, Conrad R and Küsel K. 2011. Active autotrophic ammonia-oxidizing bacteria in biofilm enrichments from simulated creek ecosystems at two ammonium concentrations respond to temperature manipulation. Applied and Environmental Microbiology 77(20): 7329–38. DOI: https://doi.org/10.1128/AEM.05864-11
Bartosch S, Wolgast I, Spieck E and Bock E. 1999. Identification of nitrite-oxidizing bacteria with monoclonal antibodies recognizing the nitrite oxidoreductase. Applied and Environmental Microbiology 65(9): 4126–33. DOI: https://doi.org/10.1128/AEM.65.9.4126-4133.1999
Fierer N, Carney K M, Horner-Devine M C and Megonigal J P. 2009. The biogeography of ammonia-oxidizing bacterial communities in soil. Microbial Ecology 58(2): 435–45. DOI: https://doi.org/10.1007/s00248-009-9517-9
Francis C A, Roberts K J, Beman J M, Santoro A E and Oakley B B. 2005. Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proceedings of the National Academy of Sciences of the United States of America 102(41): 14683–88. DOI: https://doi.org/10.1073/pnas.0506625102
Gödde M and Conrad R. 1999. Immediate and adaptational temperature effects on nitric oxide production and nitrous oxide release from nitrification and denitrification in two soils. Biology and Fertility of Soils 30(1–2): 33–40. DOI: https://doi.org/10.1007/s003740050584
Hoilijoki T H, Kettunen R H and Rintala J A. 2000. Nitrification of anaerobically pretreated municipal landfill leachate at low temperature. Water Research 34(5): 1435–46. DOI: https://doi.org/10.1016/S0043-1354(99)00278-X
http://www.water-research.net/index.php/ammonia-ingroundwater- runoff-andstreams. Ammonia in groundwater, runoff, and streams (visited December 22, 2017).
Jiao Y, Cody G D, Harding A K, Harding A K, Wilmes P, Schrenk M, Wheeler K E, Banfield J and Thelen M P. 2010. Characterization of extracellular polymeric substances from acidophilic microbial biofilms. Applied and Environmental Microbiology 76(9): 2916–22. DOI: https://doi.org/10.1128/AEM.02289-09
Khangembam C D, Sharma J G and Chakrabarti R. 2017. Diversity and abundance of ammonia-oxidizing bacteria and archaea in a freshwater recirculating aquaculture system. Hayati Journal of Biosciences 24: 215–20. DOI: https://doi.org/10.1016/j.hjb.2017.11.003
Kim Y M. 2013. Acclimatization of communities of ammonia oxidizing bacteria to seasonal changes in optimal conditions in a coke wastewater treatment plant. Bioresource Technology 147: 627–31. DOI: https://doi.org/10.1016/j.biortech.2013.08.062
Koops H P, Böttcher B, Möller U C, Pommerening-Röser A and Stehr G. 1991. Classification of eight new species of ammoniaoxidizing bacteria: Nitrosomonas communis sp. nov., Nitrosomonas ureae sp. nov., Nitrosomonas aestuarii sp. nov., Nitrosomonas marina sp. nov., Nitrosomonas nitrosa sp. nov., Nitrosomonas eutropha sp. nov., Nitrosomonas oligotropha sp. nov. and Nitrosomonas halophila sp. nov. Microbiology 137(7): 1689–99. DOI: https://doi.org/10.1099/00221287-137-7-1689
Koops H-P, Purkhold U, Pommerening-Röser A, Timmermann G and Wagner M. 2006. The Lithoautotrophic Ammonia- Oxidizing Bacteria. The Prokaryotes, pp. 778–811. (Eds) Dworkin M, Falkow S, Rosenberg E, Schleifer K H and Stackebrandt E. Springer, New York. DOI: https://doi.org/10.1007/0-387-30745-1_36
Lee S, Cho K, Lim J, Kim W and Hwang S. 2011. Acclimation and activity of ammonia-oxidizing bacteria with respect to variations in zinc concentration, temperature, and microbial population. Bioresource Technology 102(5): 4196–203. DOI: https://doi.org/10.1016/j.biortech.2010.12.035
Lei W U, Yongzhen P, Yong M A, Xu L, Lingyun L and Shuying W. 2012. The short-term effects of temperature and free ammonia on ammonium oxidization in granular and floccular nitrifying system. Chinese Journal of Chemical Engineering 20(5): 1016–23. DOI: https://doi.org/10.1016/S1004-9541(12)60431-5
Leininger S, Urich T, Schloter M, Schwark L, Qi J, Nicol G W, Prosser J I, Schuster S and Schleper C. 2006. Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature 442(7104): 806–09. DOI: https://doi.org/10.1038/nature04983
Munz G, Lubello C and Oleszkiewicz J A. 2011. Modeling the decay of ammonium oxidizing bacteria. Water Research 45(2): 557–64. DOI: https://doi.org/10.1016/j.watres.2010.09.022
Nalco Company. 2009. Nalco Water Handbook, pp. 22.13. McGraw-Hill, New York.
Newell S E, Babbin A R, Jayakumar A and Ward B B. 2011. Ammonia oxidation rates and nitrification in the Arabian Sea. Global Biogeochemical Cycles 25(4): GB4016. DOI: https://doi.org/10.1029/2010GB003940
Odell L, Kirmeyer G, Wilzak A, Jacangelo J, Marchinko J and Wolfe R. 1996. Controlling nitrification in chloraminated systems. Journal of American Water Works Association 88(7): 74. DOI: https://doi.org/10.1002/j.1551-8833.1996.tb06586.x
Rotthauwe J H, Witzel K P and Liesack W. 1997. The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations Applied and Environmental Microbiology 63(12): 4704–12. DOI: https://doi.org/10.1128/aem.63.12.4704-4712.1997
Santoro A E, Casciotti K L and Francis C A. 2010. Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current. Environmental Microbiology 12(7): 1989–2006. DOI: https://doi.org/10.1111/j.1462-2920.2010.02205.x
Spieck E and Lipski A. 2011. Cultivation, growth physiology, and chemotaxonomy of nitrite-oxidizing bacteria. Methods in Enzymology 486(Part A): 109–30. DOI: https://doi.org/10.1016/B978-0-12-381294-0.00005-5
Stark J M. 1996. Modeling the temperature response of nitrification. Biogeochemistry 35(3): 433–45. DOI: https://doi.org/10.1007/BF02183035
Szukics U, Abell G C J, Hödl V, Mitter B, Sessitsch A, Hackl E and Zechmeister-Boltenstern S. 2010. Nitrifiers and denitrifiers respond rapidly to changed moisture and increasing temperature in a pristine forest soil. FEMS Microbiology Ecology 72(3): 395–06. DOI: https://doi.org/10.1111/j.1574-6941.2010.00853.x
Thamdrup B and Fleischer S. 1998. Temperature dependence of oxygen respiration, nitrogen mineralization, and nitrification in Arctic sediments. Aquatic Microbial Ecology 15(2): 191– 99. DOI: https://doi.org/10.3354/ame015191
Tokuyama T, Mine A, Kamiyama K, Yabe R, Satoh K, Matsumoto H, Takahashi R and Itonaga K. 2004. Nitrosomonas communis strain YNSRA, an ammonia-oxidizing bacterium, isolated from the reed rhizoplane in an aquaponics plant. Journal of Bioscience and Bioengineering 98(4): 309–12. DOI: https://doi.org/10.1016/S1389-1723(04)00288-9
Tourna M, Stieglmeier M, Spang A, Könneke M, Schintlmeister A, Urich T, Engel M, Schloter M, Wagner M, Richter A and Schleper C. 2011. Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proceedings of the National Academy of Sciences 108(20): 8420–25. DOI: https://doi.org/10.1073/pnas.1013488108
Urakawa H, Tajima Y, Numata Y and Tsuneda S. 2008. Low temperature decreases the phylogenetic diversity of ammoniaoxidizing archaea and bacteria in aquarium biofiltration systems. Applied and Environmental Microbiology 74(3): 894– 900. DOI: https://doi.org/10.1128/AEM.01529-07
Wagner M, Rath G, Amann R, Koops H P and Schleifer K H. 1995. In situ identification of ammonia-oxidizing bacteria. Systematic and Applied Microbiology 18(2): 251–64. DOI: https://doi.org/10.1016/S0723-2020(11)80396-6
Wu Y, Ke X, Hernández M, Wang B, Dumont M G, Jia Z and Conrad R. 2013. Autotrophic growth of bacterial and archaeal ammonia oxidizers in freshwater sediment microcosms incubated at different temperatures. Applied and Environmental Microbiology 79(9): 3076–84. DOI: https://doi.org/10.1128/AEM.00061-13
Wuchter C, Abbas B, Coolen M J L, Herfort L, Bleijswijk J, van Timmers P, Strous M, Teira E, Herndl G J, Middelburg J J, Schouten S and Damsté J S S. 2006. Archaeal nitrification in the ocean. Proceedings of the National Academy of Sciences 103(33): 12317–22. DOI: https://doi.org/10.1073/pnas.0600756103
Zhao W, Song Z, Jiang H, Li W, Mou X, Romanek C S, Wiegel J, Dong H and Zhang C L. 2011. Ammonia-oxidizing archaea in Kamchatka hot Springs. Geomicrobiology Journal 28(2): 149– 59. DOI: https://doi.org/10.1080/01490451003753076
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