VP2 Gne based Molecular Characterization of Blue tongue Virus Serotype 16 Isolated in 2017 from Andhra Pradesh, India
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Keywords:
Bluetongue, serotype-16, VP2, topotypeAbstract
Bluetongue virus (BTV) genome consists of 10 segmented double-stranded ribonucleic acid (dsRNA). Of these, genome segment 2 (Seg-2), which encodes outer capsid protein VP2 is the primary determinant of virus serotype. In the present study, partial VP2 gene of KRL2/2017 (BTV-16) isolate collected from Kurnool district of Andhra Pradesh was amplified to know the evolutionary relationship of this isolate with previously reported Indian and global BTV-16 isolates. Seg-2 sequence data of KRL2/2017, showed >98% nucleotide identity with other Indian isolates. Comparison of this isolate with BTV-16 isolates across the world, showed higher sequence homology to isolates of Japan followed by Greece and China than to those of isolates from South Africa, Italy, UK, Australia and Indonesia. Phylogenetic analysis suggest that the isolate of the current study belong to eastern topotype similar to the viruses recovered from Japan, Greece and China reflecting their common eastern origin.
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Alexander, K. A., MacLachlan, N. J., Kat, P. W., House, C., O'Brien, S. J., Lerche, N. W and McNutt, J. W. (1994). Evidence of natural bluetongue virus infection among African carnivores. The American journal of tropical medicine and hygiene, 51(5):568-576.
Clavijo, A., Heckert, R.A., Dulac, G.0 and Afshar, A. (2000). Isolation and identification of bluetongue virus. Journal of Virological Methods, 87:13-23
Du Toit, R. M. (1944). The transmission of bluetongue and horse-sickness by Culicoides. Onderstepoort Journal of veterinary Science and animal Industry, 19:7-16.
Gould, A. R and Pritchard, L. I. (1990). Relationships amongst bluetongue viruses revealed by comparisons of capsid and outer coat protein nucleotide sequences. Virus research, 17(1):31¬52.
Gould, A. R and Hyatt, A. D. (1994). The orbivirus genus.Diversity, structure, replication and phylogenetic relationships. Comparative immunology, microbiology and infectious diseases, 17(3-4):163-188.
Howell, P. G. (1970). The antigenic classification and distribution of naturally occurring strains bluetongue virus. Journal of the South African Veterinary Association, 41(3):215¬223.
Kumar, L., Batra, K., Chaudhary, D., Gupta, A. K., Dalal, A., Kalyanaraman, B and Maan, S. (2016). Full-genome sequence analysis of a reassortant strain of Bluetongue virus serotype 16 from southern India. Genome Announc., 4(4): e00783-16.
Maan, S., Maan, N. S., Samuel, A. R., Rao, S., Attoui, H and Mertens, P. P. C. (2007). Analysis and phylogenetic comparisons of full-length VP2 genes of the 24 bluetongue virus serotypes. Journal of General Virology, 88(2): 621-630.
Maan, S., Maan, N. S., Van Rijn, P. A., Van Gennip, R. G., Sanders, A., Wright, I. M and Potgieter, A. C. (2010). Full genome characterisation of bluetongue virus serotype 6 from the Netherlands 2008 and comparison to other field and vaccine strains. PloS one, 5(4): el0323.
Maan, N. S., Maan, S., Belaganahalli, M. N., Ostlund, E. N., Johnson, D. J., Nomikou, K and Mertens, P. P. (2012a). Identification and differentiation of the twenty-six bluetongue virus serotypes by RT—PCR amplification of the serotype-specific genome segment 2. PloS one, 7(2):e32601.
Maan, S., Maan, N. S., Singh, K. P., Belaganahalli, M. N., Guimera, M., Pullinger, G and Mertens, P. P. (2012b). Complete genome sequence analysis of a reference strain of bluetongue virus serotype 16. Journal of Virology, 86 (18):10255-10256.
Maan, S., Maan, N. S., Belaganahalli, M. N., Rao, P. P., Singh, K. P., Hemadri, D and Chandel, B. S. (2015). Full¬genome sequencing as a basis for molecular epidemiology studies of bluetongue virus in India. PLoS One, 10(6):e0131257.
MacLachlan, N. J. (1994). The pathogenesis and immunology of bluetongue virus infection of ruminants. Comparative immunology, microbiology and infectious diseases, 17(3-4):197-206.
Mertens, P. P. C., Brown, F and Sangar, D. V. (1984). Assignment of the genome segments of bluetongue virus type 1 to the proteins which they encode. Virology, 135(1):207-217.
Mertens, P. P., Diprose, J., Maan, S., Singh, K. P., Attoui, H and Samuel, A. R. (2004). Bluetongue virus replication, molecular and structural biology. Vet Ital, 40(4) :426-437. OIE Terrestrial Manual. 2012;1 and 2 ISBN 978-92-9044-878-5.
Ratinier, M., Caporale, M., Golder, M., Franzoni, G., Allan, K., Nunes, S. F and Palmarini, M. (2011). Identification and characterization of a novel non-structural protein of bluetongue virus. PLoS pathogens, 7(12):e1002477.
Reddy, Y. V., Krishnajyothi, Y., Susmitha, B., Devi, B. V., Brundavanam, Y., Gollapalli, S. R and Sunitha, G. (2016). Molecular typing of bluetongue viruses isolated over a decade in South India. Transboundary and emerging diseases, 63(5):e412-e418.
Saegerman, C., Bolkaerts, B., Baricalla, C., Raes, M., Wiggers, L., de Leeuw, I and De Clercq, K. (2011). The impact of naturally-occurring, trans-placental bluetongue virus serotype-8 infection on reproductive performance insheep. The Veterinary Journal, 187(1): 2-80.
Saxena, A., Biswas, S. K., Chand, K., Naskar, J., Chauhan, A., Mohd, G and Tewari, N. (2018). Genetic and phylogenetic analysis of the outer capsid protein genes of Indian isolates of bluetongue virus serotype-16. Veterinary World, 11(8):1025.
Shafiq, M., Minakshi, P., Bhateja, A., Ranjan, K and Prasad, G. (2013). Evidence of genetic reassortment between Indian isolate of bluetongue virus serotype 21 (BTV-21) and bluetongue virus serotype 16 (BTV¬16). Virus research, 173(2):336-343.
Shirafuji, H., Yanase, T., Kato, T and Yamakawa, M. (2012). Genetic and phylogenetic characterization of genome segments 2 and 6 of bluetongue virus isolates in Japan from 1985 to 2008. Journal of General Virology, 93(7):1465-1473.
Verwoerd, D. W., Louw, H and Oellermann, R. A. (1970). Characterization of bluetongue virus ribonucleic acid. Journal of Virology, 5(1):1-7.
Wright, I. M. (2014). Serological and genetic characterisation of putative new serotypes of bluetongue virus and epizootic haemorrhagic disease virus isolated from an Alpaca (Doctoral dissertation).
Zientara, S., Sailleau, C., Viarouge, C., Hoper, D., Beer, M., Jenckel, M and Vitour, D. (2014).Novel bluetongue virus in goats, Corsica, France, 2014. Emerging infectious diseases, 20(12): 2123 .
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